Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Gm13312-201ENSMUST00000119631 718 ntBASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Gm2756-201ENSMUST00000195851 400 ntBASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps4aQ8VEJ9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Gm15165-201ENSMUST00000118140 502 ntBASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps4aQ8VEJ9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Gm15467-201ENSMUST00000120582 445 ntBASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Gm12350-201ENSMUST00000121208 462 ntBASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vps4aQ8VEJ9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Gm27867-201ENSMUST00000184778 125 ntBASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Gm43575-201ENSMUST00000196420 516 ntBASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vps4aQ8VEJ9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms