Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.58■□□□□ 0.08
CopaQ8CIE6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.58■□□□□ 0.08
CopaQ8CIE6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CopaQ8CIE6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Gm7222-201ENSMUST00000117512 906 ntBASIC15.57■□□□□ 0.08
CopaQ8CIE6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Gm27628-201ENSMUST00000184911 107 ntBASIC15.57■□□□□ 0.08
CopaQ8CIE6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.57■□□□□ 0.08
CopaQ8CIE6 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.57■□□□□ 0.08
CopaQ8CIE6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CopaQ8CIE6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 BC037039-201ENSMUST00000192003 2205 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm8825-201ENSMUST00000182565 998 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm4518-201ENSMUST00000182638 718 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.56■□□□□ 0.08
CopaQ8CIE6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CopaQ8CIE6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CopaQ8CIE6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CopaQ8CIE6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms