Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Gm7862-201ENSMUST00000121461 292 ntBASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Gm15173-201ENSMUST00000122049 433 ntBASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Gm5682-201ENSMUST00000173402 505 ntBASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sh3rf3Q8C120 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sh3rf3Q8C120 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Mir8098-201ENSMUST00000184011 137 ntBASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sh3rf3Q8C120 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Gm8318-201ENSMUST00000182954 872 ntBASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sh3rf3Q8C120 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms