Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdk5rap1Q8BTW8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm15427-201ENSMUST00000117288 531 ntBASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdk5rap1Q8BTW8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap1Q8BTW8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap1Q8BTW8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap1Q8BTW8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap1Q8BTW8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap1Q8BTW8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap1Q8BTW8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
Cdk5rap1Q8BTW8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdk5rap1Q8BTW8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm26308-201ENSMUST00000157768 69 ntBASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdk5rap1Q8BTW8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdk5rap1Q8BTW8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms