Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rnf38Q8BI21 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Gm25745-201ENSMUST00000174945 133 ntBASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Gm27867-201ENSMUST00000184778 125 ntBASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Gm7506-201ENSMUST00000207758 815 ntBASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf38Q8BI21 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf38Q8BI21 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Gm18622-201ENSMUST00000219361 595 ntBASIC14.71□□□□□ -0.05
Rnf38Q8BI21 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Rnf38Q8BI21 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms