Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Gm24589-201ENSMUST00000116692 94 ntBASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Rps4l-201ENSMUST00000071745 943 ntBASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clrn3Q8BHH8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn3Q8BHH8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn3Q8BHH8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Clrn3Q8BHH8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Clrn3Q8BHH8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn3Q8BHH8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn3Q8BHH8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn3Q8BHH8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms