Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Gm12260-201ENSMUST00000122447 411 ntBASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Gm43767-201ENSMUST00000198933 381 ntBASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Atg4dQ8BGV9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Gm2272-201ENSMUST00000194903 582 ntBASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Atg4dQ8BGV9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Gm15467-201ENSMUST00000120582 445 ntBASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Mir8117-201ENSMUST00000184773 107 ntBASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Atg4dQ8BGV9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Atg4dQ8BGV9 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4dQ8BGV9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4dQ8BGV9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4dQ8BGV9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Atg4dQ8BGV9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms