Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Gm45167-201ENSMUST00000208007 322 ntBASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.37□□□□□ -0.11
Atg4bQ8BGE6 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Gm13036-201ENSMUST00000117799 748 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Gm10499-201ENSMUST00000174094 934 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Gm15590-201ENSMUST00000078419 552 ntBASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Atg4bQ8BGE6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Mir5126-201ENSMUST00000175513 77 ntBASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Gm2651-201ENSMUST00000203560 838 ntBASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Atg4bQ8BGE6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.34□□□□□ -0.11
Atg4bQ8BGE6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms