Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp8Q80U87 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usp8Q80U87 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.33■□□□□ 0.04
Usp8Q80U87 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Usp8Q80U87 Gm7284-201ENSMUST00000131667 944 ntBASIC15.33■□□□□ 0.04
Usp8Q80U87 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.33■□□□□ 0.04
Usp8Q80U87 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.33■□□□□ 0.04
Usp8Q80U87 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp8Q80U87 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp8Q80U87 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Usp8Q80U87 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Gm15165-201ENSMUST00000118140 502 ntBASIC15.31■□□□□ 0.04
Usp8Q80U87 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.31■□□□□ 0.04
Usp8Q80U87 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Usp8Q80U87 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.3■□□□□ 0.04
Usp8Q80U87 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Usp8Q80U87 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.3■□□□□ 0.04
Usp8Q80U87 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Usp8Q80U87 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms