Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gm44492-201ENSMUST00000197012 141 ntBASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Prpf38bQ80SY5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Gm5866-201ENSMUST00000177881 973 ntBASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Prpf38bQ80SY5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Gm13823-201ENSMUST00000119930 345 ntBASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Gm44335-201ENSMUST00000196879 141 ntBASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Gm44297-201ENSMUST00000198304 141 ntBASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Gm44346-201ENSMUST00000198851 141 ntBASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Prpf38bQ80SY5 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Prpf38bQ80SY5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms