Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Otub1Q7TQI3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Otub1Q7TQI3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Otub1Q7TQI3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Otub1Q7TQI3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Otub1Q7TQI3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Otub1Q7TQI3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Gm21362-201ENSMUST00000194272 928 ntBASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Otub1Q7TQI3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Otub1Q7TQI3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.52□□□□□ -0.09
Otub1Q7TQI3 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.52□□□□□ -0.09
Otub1Q7TQI3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.52□□□□□ -0.09
Otub1Q7TQI3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Otub1Q7TQI3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Otub1Q7TQI3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms