Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cspg5Q71M36 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.81■□□□□ 0.12
Cspg5Q71M36 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Mir6404-201ENSMUST00000183699 94 ntBASIC15.81■□□□□ 0.12
Cspg5Q71M36 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.81■□□□□ 0.12
Cspg5Q71M36 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cspg5Q71M36 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.8■□□□□ 0.12
Cspg5Q71M36 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.8■□□□□ 0.12
Cspg5Q71M36 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.8■□□□□ 0.12
Cspg5Q71M36 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cspg5Q71M36 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Cspg5Q71M36 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.79■□□□□ 0.12
Cspg5Q71M36 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.79■□□□□ 0.12
Cspg5Q71M36 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.79■□□□□ 0.12
Cspg5Q71M36 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.79■□□□□ 0.12
Cspg5Q71M36 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.79■□□□□ 0.12
Cspg5Q71M36 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cspg5Q71M36 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg5Q71M36 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cspg5Q71M36 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cspg5Q71M36 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cspg5Q71M36 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms