Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.2■□□□□ 0.5
Npc1l1Q6T3U4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Gm20553-201ENSMUST00000204205 844 ntBASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Npc1l1Q6T3U4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Celf4-206ENSMUST00000224553 1729 ntBASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Npc1l1Q6T3U4 BC037039-201ENSMUST00000192003 2205 ntBASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Npc1l1Q6T3U4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Npc1l1Q6T3U4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms