Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Gm5866-201ENSMUST00000177881 973 ntBASIC17.77■□□□□ 0.44
Nup98Q6PFD9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nup98Q6PFD9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Nup98Q6PFD9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.77■□□□□ 0.43
Nup98Q6PFD9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.77■□□□□ 0.43
Nup98Q6PFD9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Nup98Q6PFD9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nup98Q6PFD9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup98Q6PFD9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.77■□□□□ 0.43
Nup98Q6PFD9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.77■□□□□ 0.43
Nup98Q6PFD9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nup98Q6PFD9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Gm5566-201ENSMUST00000116118 459 ntBASIC17.76■□□□□ 0.43
Nup98Q6PFD9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nup98Q6PFD9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Gm37230-201ENSMUST00000194491 818 ntBASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Gm6888-201ENSMUST00000221983 706 ntBASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nup98Q6PFD9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Gm14767-201ENSMUST00000121559 586 ntBASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Olfr286-202ENSMUST00000205305 969 ntBASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Nup98Q6PFD9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.74■□□□□ 0.43
Nup98Q6PFD9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup98Q6PFD9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup98Q6PFD9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Nup98Q6PFD9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Nup98Q6PFD9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.73■□□□□ 0.43
Nup98Q6PFD9 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.73■□□□□ 0.43
Nup98Q6PFD9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.73■□□□□ 0.43
Nup98Q6PFD9 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.73■□□□□ 0.43
Nup98Q6PFD9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Nup98Q6PFD9 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms