Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CtifQ6PEE2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CtifQ6PEE2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Gm11539-201ENSMUST00000119837 557 ntBASIC16.29■□□□□ 0.2
CtifQ6PEE2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.29■□□□□ 0.2
CtifQ6PEE2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CtifQ6PEE2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.28■□□□□ 0.2
CtifQ6PEE2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.28■□□□□ 0.2
CtifQ6PEE2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.28■□□□□ 0.2
CtifQ6PEE2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Mir6404-201ENSMUST00000183699 94 ntBASIC16.28■□□□□ 0.2
CtifQ6PEE2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CtifQ6PEE2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.27■□□□□ 0.2
CtifQ6PEE2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CtifQ6PEE2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.27■□□□□ 0.19
CtifQ6PEE2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CtifQ6PEE2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CtifQ6PEE2 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.26■□□□□ 0.19
CtifQ6PEE2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CtifQ6PEE2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CtifQ6PEE2 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CtifQ6PEE2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CtifQ6PEE2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.26■□□□□ 0.19
CtifQ6PEE2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CtifQ6PEE2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms