Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Gm16061-201ENSMUST00000122167 857 ntBASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Gm44450-201ENSMUST00000199528 114 ntBASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rnf220Q6PDX6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Gm27011-201ENSMUST00000182352 972 ntBASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rnf220Q6PDX6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.46□□□□□ -0.1
Rnf220Q6PDX6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Gm5417-201ENSMUST00000079706 384 ntBASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rnf220Q6PDX6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms