Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ParpbpQ6IRT3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ParpbpQ6IRT3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ParpbpQ6IRT3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.33□□□□□ -0.11
ParpbpQ6IRT3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ParpbpQ6IRT3 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ParpbpQ6IRT3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ParpbpQ6IRT3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Gm7461-201ENSMUST00000058918 827 ntBASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ParpbpQ6IRT3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Gm25990-201ENSMUST00000102440 86 ntBASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Gm27646-201ENSMUST00000183989 110 ntBASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.32□□□□□ -0.12
ParpbpQ6IRT3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ParpbpQ6IRT3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.3□□□□□ -0.12
ParpbpQ6IRT3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms