Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Gm14722-201ENSMUST00000118943 689 ntBASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Gm7506-201ENSMUST00000207758 815 ntBASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhga7Q6DD96 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga7Q6DD96 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga7Q6DD96 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.83□□□□□ -0.03
Pcdhga7Q6DD96 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhga7Q6DD96 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Gm33142-201ENSMUST00000193913 867 ntBASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhga7Q6DD96 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Gm4459-201ENSMUST00000118750 468 ntBASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Gm15372-201ENSMUST00000120729 834 ntBASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhga7Q6DD96 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga7Q6DD96 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga7Q6DD96 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhga7Q6DD96 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhga7Q6DD96 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.81□□□□□ -0.04
Pcdhga7Q6DD96 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.81□□□□□ -0.04
Pcdhga7Q6DD96 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms