Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Foxc1Q61572 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Foxc1Q61572 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.24□□□□□ -0.61
Foxc1Q61572 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Foxc1Q61572 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Gm19080-201ENSMUST00000196082 550 ntBASIC11.24□□□□□ -0.61
Foxc1Q61572 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.24□□□□□ -0.61
Foxc1Q61572 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.24□□□□□ -0.61
Foxc1Q61572 Gm35638-201ENSMUST00000220724 652 ntBASIC11.24□□□□□ -0.61
Foxc1Q61572 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Foxc1Q61572 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Foxc1Q61572 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.24□□□□□ -0.61
Foxc1Q61572 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Foxc1Q61572 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.23□□□□□ -0.61
Foxc1Q61572 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm8097-201ENSMUST00000117903 829 ntBASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm7862-201ENSMUST00000121461 292 ntBASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.23□□□□□ -0.61
Foxc1Q61572 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm4535-201ENSMUST00000182274 558 ntBASIC11.23□□□□□ -0.61
Foxc1Q61572 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.23□□□□□ -0.61
Foxc1Q61572 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.23□□□□□ -0.61
Foxc1Q61572 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm10355-201ENSMUST00000097146 517 ntBASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm42651-201ENSMUST00000199851 1339 ntBASIC11.23□□□□□ -0.61
Foxc1Q61572 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Foxc1Q61572 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Foxc1Q61572 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Foxc1Q61572 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.22□□□□□ -0.61
Foxc1Q61572 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Foxc1Q61572 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.22□□□□□ -0.61
Foxc1Q61572 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms