Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Hif1aQ61221 Gm11950-201ENSMUST00000121615 838 ntBASIC15.43■□□□□ 0.06
Hif1aQ61221 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.43■□□□□ 0.06
Hif1aQ61221 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.43■□□□□ 0.06
Hif1aQ61221 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Hif1aQ61221 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Hif1aQ61221 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Hif1aQ61221 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Hif1aQ61221 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.42■□□□□ 0.06
Hif1aQ61221 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Hif1aQ61221 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.42■□□□□ 0.06
Hif1aQ61221 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Hif1aQ61221 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Hif1aQ61221 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.42■□□□□ 0.06
Hif1aQ61221 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Hif1aQ61221 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Hif1aQ61221 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Hif1aQ61221 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.41■□□□□ 0.06
Hif1aQ61221 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Gm29518-201ENSMUST00000190858 372 ntBASIC15.41■□□□□ 0.06
Hif1aQ61221 Gm17808-201ENSMUST00000200859 894 ntBASIC15.41■□□□□ 0.06
Hif1aQ61221 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.41■□□□□ 0.06
Hif1aQ61221 Gm45328-201ENSMUST00000210942 917 ntBASIC15.41■□□□□ 0.06
Hif1aQ61221 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Hif1aQ61221 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Hif1aQ61221 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Hif1aQ61221 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Hif1aQ61221 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.4■□□□□ 0.06
Hif1aQ61221 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Hif1aQ61221 Gm9172-201ENSMUST00000212092 954 ntBASIC15.4■□□□□ 0.06
Hif1aQ61221 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.4■□□□□ 0.06
Hif1aQ61221 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.4■□□□□ 0.06
Hif1aQ61221 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms