Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcfc1Q61191 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.69□□□□□ -0.38
Hcfc1Q61191 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hcfc1Q61191 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.68□□□□□ -0.38
Hcfc1Q61191 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.68□□□□□ -0.38
Hcfc1Q61191 Gm14042-201ENSMUST00000120139 833 ntBASIC12.68□□□□□ -0.38
Hcfc1Q61191 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.68□□□□□ -0.38
Hcfc1Q61191 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.68□□□□□ -0.38
Hcfc1Q61191 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hcfc1Q61191 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm4875-201ENSMUST00000118257 786 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm12138-201ENSMUST00000122180 951 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm14928-201ENSMUST00000120198 477 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm15321-201ENSMUST00000121290 288 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm27838-201ENSMUST00000184829 128 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gm43433-201ENSMUST00000196573 481 ntBASIC12.67□□□□□ -0.38
Hcfc1Q61191 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hcfc1Q61191 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hcfc1Q61191 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcfc1Q61191 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.66□□□□□ -0.38
Hcfc1Q61191 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcfc1Q61191 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcfc1Q61191 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hcfc1Q61191 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hcfc1Q61191 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms