Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
NfkbibQ60778 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NfkbibQ60778 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NfkbibQ60778 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NfkbibQ60778 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NfkbibQ60778 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
NfkbibQ60778 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.26■□□□□ 0.51
NfkbibQ60778 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.26■□□□□ 0.51
NfkbibQ60778 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.26■□□□□ 0.51
NfkbibQ60778 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.26■□□□□ 0.51
NfkbibQ60778 Mir1895-201ENSMUST00000122615 79 ntBASIC18.26■□□□□ 0.51
NfkbibQ60778 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.26■□□□□ 0.51
NfkbibQ60778 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.26■□□□□ 0.51
NfkbibQ60778 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.26■□□□□ 0.51
NfkbibQ60778 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.26■□□□□ 0.51
NfkbibQ60778 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.26■□□□□ 0.51
NfkbibQ60778 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NfkbibQ60778 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
NfkbibQ60778 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NfkbibQ60778 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.25■□□□□ 0.51
NfkbibQ60778 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NfkbibQ60778 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
NfkbibQ60778 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.25■□□□□ 0.51
NfkbibQ60778 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.25■□□□□ 0.51
NfkbibQ60778 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NfkbibQ60778 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NfkbibQ60778 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NfkbibQ60778 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.24■□□□□ 0.51
NfkbibQ60778 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.24■□□□□ 0.51
NfkbibQ60778 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.24■□□□□ 0.51
NfkbibQ60778 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NfkbibQ60778 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.24■□□□□ 0.51
NfkbibQ60778 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.24■□□□□ 0.51
NfkbibQ60778 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NfkbibQ60778 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NfkbibQ60778 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NfkbibQ60778 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.23■□□□□ 0.51
NfkbibQ60778 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.23■□□□□ 0.51
NfkbibQ60778 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC18.23■□□□□ 0.51
NfkbibQ60778 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.23■□□□□ 0.51
NfkbibQ60778 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.23■□□□□ 0.51
NfkbibQ60778 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.23■□□□□ 0.51
NfkbibQ60778 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.23■□□□□ 0.51
NfkbibQ60778 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NfkbibQ60778 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NfkbibQ60778 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NfkbibQ60778 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NfkbibQ60778 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms