Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Gm29707-201ENSMUST00000196325 491 ntBASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav8d-1Q5R1H8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Gm11950-201ENSMUST00000121615 838 ntBASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Gm6345-202ENSMUST00000180900 204 ntBASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Gm33142-201ENSMUST00000193913 867 ntBASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav8d-1Q5R1H8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8d-1Q5R1H8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8d-1Q5R1H8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8d-1Q5R1H8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8d-1Q5R1H8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8d-1Q5R1H8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8d-1Q5R1H8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav8d-1Q5R1H8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Gm45328-201ENSMUST00000210942 917 ntBASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav8d-1Q5R1H8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms