Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav5d-4Q5R1F6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav5d-4Q5R1F6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Gm15358-201ENSMUST00000119249 520 ntBASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Gm43347-201ENSMUST00000200226 580 ntBASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav5d-4Q5R1F6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav5d-4Q5R1F6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms