Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm33320-201ENSMUST00000192232 530 ntBASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm12585-201ENSMUST00000117307 290 ntBASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm6244-201ENSMUST00000178732 841 ntBASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 AA619741-201ENSMUST00000195095 646 ntBASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 Gm8463-201ENSMUST00000208573 613 ntBASIC14.48□□□□□ -0.09
Col27a1Q5QNQ9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col27a1Q5QNQ9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 BC001981-202ENSMUST00000191393 1545 ntBASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Gm2495-201ENSMUST00000191160 466 ntBASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col27a1Q5QNQ9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Col27a1Q5QNQ9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col27a1Q5QNQ9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col27a1Q5QNQ9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col27a1Q5QNQ9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col27a1Q5QNQ9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col27a1Q5QNQ9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Col27a1Q5QNQ9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col27a1Q5QNQ9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Gm23931-201ENSMUST00000103842 109 ntBASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Gm43179-201ENSMUST00000198797 275 ntBASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.45□□□□□ -0.1
Col27a1Q5QNQ9 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms