Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ddx49Q4FZF3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx49Q4FZF3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ddx49Q4FZF3 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Gm27618-201ENSMUST00000183671 60 ntBASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ddx49Q4FZF3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ddx49Q4FZF3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.71■□□□□ 0.42
Ddx49Q4FZF3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ddx49Q4FZF3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.42
Ddx49Q4FZF3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Gm38294-201ENSMUST00000192831 381 ntBASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.7■□□□□ 0.42
Ddx49Q4FZF3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Gm2423-201ENSMUST00000074863 733 ntBASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ddx49Q4FZF3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ddx49Q4FZF3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms