Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Gm45453-201ENSMUST00000211758 853 ntBASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Gm15823-201ENSMUST00000064305 670 ntBASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shank3Q4ACU6 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Gm28631-201ENSMUST00000190740 334 ntBASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Gm37917-201ENSMUST00000194711 392 ntBASIC18.7■□□□□ 0.58
Shank3Q4ACU6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shank3Q4ACU6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Gm9229-201ENSMUST00000222777 126 ntBASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Gm10766-202ENSMUST00000194123 606 ntBASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shank3Q4ACU6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Gm37230-201ENSMUST00000194491 818 ntBASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Gm43630-201ENSMUST00000201550 776 ntBASIC18.68■□□□□ 0.58
Shank3Q4ACU6 Gm18062-201ENSMUST00000208020 547 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms