Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ckap2Q3V1H1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap2Q3V1H1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Ckap2Q3V1H1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap2Q3V1H1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Gm12008-201ENSMUST00000117791 755 ntBASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap2Q3V1H1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap2Q3V1H1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms