Protein–RNA interactions for Protein: Q3SXD3

Hddc2, HD domain-containing protein 2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hddc2Q3SXD3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hddc2Q3SXD3 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hddc2Q3SXD3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hddc2Q3SXD3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Hddc2Q3SXD3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hddc2Q3SXD3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hddc2Q3SXD3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.16□□□□□ -0.14
Hddc2Q3SXD3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hddc2Q3SXD3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hddc2Q3SXD3 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.16□□□□□ -0.14
Hddc2Q3SXD3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms