Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Gm19184-201ENSMUST00000196798 928 ntBASIC13.53□□□□□ -0.24
Chd8Q09XV5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.53□□□□□ -0.24
Chd8Q09XV5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Gm11814-201ENSMUST00000119515 929 ntBASIC13.53□□□□□ -0.24
Chd8Q09XV5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.53□□□□□ -0.24
Chd8Q09XV5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Chd8Q09XV5 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.52□□□□□ -0.24
Chd8Q09XV5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chd8Q09XV5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chd8Q09XV5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chd8Q09XV5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chd8Q09XV5 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.52□□□□□ -0.24
Chd8Q09XV5 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.52□□□□□ -0.24
Chd8Q09XV5 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chd8Q09XV5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Chd8Q09XV5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Chd8Q09XV5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Chd8Q09XV5 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.52□□□□□ -0.25
Chd8Q09XV5 Gm13342-201ENSMUST00000121055 207 ntBASIC13.52□□□□□ -0.25
Chd8Q09XV5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Gm42997-202ENSMUST00000200321 985 ntBASIC13.52□□□□□ -0.25
Chd8Q09XV5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.52□□□□□ -0.25
Chd8Q09XV5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Chd8Q09XV5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.51□□□□□ -0.25
Chd8Q09XV5 B9d1os-201ENSMUST00000137010 674 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm8652-201ENSMUST00000181363 964 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gm18307-201ENSMUST00000206864 949 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.51□□□□□ -0.25
Chd8Q09XV5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd8Q09XV5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd8Q09XV5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms