Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a1Q05722 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Col9a1Q05722 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.89□□□□□ -0.03
Col9a1Q05722 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a1Q05722 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.89□□□□□ -0.03
Col9a1Q05722 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.89□□□□□ -0.03
Col9a1Q05722 Gm19164-201ENSMUST00000210667 640 ntBASIC14.89□□□□□ -0.03
Col9a1Q05722 Gm19220-201ENSMUST00000222682 803 ntBASIC14.89□□□□□ -0.03
Col9a1Q05722 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a1Q05722 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a1Q05722 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col9a1Q05722 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a1Q05722 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a1Q05722 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a1Q05722 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Col9a1Q05722 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col9a1Q05722 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col9a1Q05722 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Gm14667-201ENSMUST00000119448 1350 ntBASIC14.88□□□□□ -0.03
Col9a1Q05722 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.88□□□□□ -0.03
Col9a1Q05722 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.88□□□□□ -0.03
Col9a1Q05722 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.88□□□□□ -0.03
Col9a1Q05722 Gm8099-201ENSMUST00000200510 742 ntBASIC14.88□□□□□ -0.03
Col9a1Q05722 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC14.88□□□□□ -0.03
Col9a1Q05722 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.88□□□□□ -0.03
Col9a1Q05722 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Gm9797-201ENSMUST00000052902 613 ntBASIC14.88□□□□□ -0.03
Col9a1Q05722 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.88□□□□□ -0.03
Col9a1Q05722 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.88□□□□□ -0.03
Col9a1Q05722 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Col9a1Q05722 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col9a1Q05722 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Gm17794-201ENSMUST00000220252 955 ntBASIC14.87□□□□□ -0.03
Col9a1Q05722 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.87□□□□□ -0.03
Col9a1Q05722 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Gm45657-201ENSMUST00000211318 1349 ntBASIC14.87□□□□□ -0.03
Col9a1Q05722 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Col9a1Q05722 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col9a1Q05722 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a1Q05722 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col9a1Q05722 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Col9a1Q05722 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a1Q05722 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a1Q05722 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.86□□□□□ -0.03
Col9a1Q05722 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.86□□□□□ -0.03
Col9a1Q05722 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col9a1Q05722 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col9a1Q05722 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms