Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim43bP86448 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim43bP86448 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.7■□□□□ 0.1
Trim43bP86448 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim43bP86448 Gm12644-201ENSMUST00000119935 606 ntBASIC15.7■□□□□ 0.1
Trim43bP86448 Mir8098-201ENSMUST00000184011 137 ntBASIC15.7■□□□□ 0.1
Trim43bP86448 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim43bP86448 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.7■□□□□ 0.1
Trim43bP86448 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trim43bP86448 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Efs-202ENSMUST00000227037 2540 ntBASIC15.7■□□□□ 0.1
Trim43bP86448 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim43bP86448 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trim43bP86448 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Trim43bP86448 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim43bP86448 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trim43bP86448 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim43bP86448 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trim43bP86448 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim43bP86448 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.69■□□□□ 0.1
Trim43bP86448 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim43bP86448 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim43bP86448 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Trim43bP86448 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim43bP86448 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.68■□□□□ 0.1
Trim43bP86448 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim43bP86448 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim43bP86448 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trim43bP86448 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim43bP86448 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim43bP86448 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43bP86448 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.67■□□□□ 0.1
Trim43bP86448 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43bP86448 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43bP86448 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43bP86448 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim43bP86448 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.67■□□□□ 0.1
Trim43bP86448 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim43bP86448 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.67■□□□□ 0.1
Trim43bP86448 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trim43bP86448 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim43bP86448 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim43bP86448 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms