Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CiitaP79621 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.48■□□□□ 0.23
CiitaP79621 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.48■□□□□ 0.23
CiitaP79621 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CiitaP79621 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.48■□□□□ 0.23
CiitaP79621 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CiitaP79621 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CiitaP79621 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CiitaP79621 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.47■□□□□ 0.23
CiitaP79621 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.47■□□□□ 0.23
CiitaP79621 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.47■□□□□ 0.23
CiitaP79621 Mir1895-201ENSMUST00000122615 79 ntBASIC16.47■□□□□ 0.23
CiitaP79621 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.47■□□□□ 0.23
CiitaP79621 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.47■□□□□ 0.23
CiitaP79621 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.47■□□□□ 0.23
CiitaP79621 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.47■□□□□ 0.23
CiitaP79621 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.47■□□□□ 0.23
CiitaP79621 Gm10154-201ENSMUST00000084445 354 ntBASIC16.47■□□□□ 0.23
CiitaP79621 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CiitaP79621 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CiitaP79621 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CiitaP79621 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.46■□□□□ 0.23
CiitaP79621 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CiitaP79621 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CiitaP79621 Gm11025-201ENSMUST00000140773 466 ntBASIC16.46■□□□□ 0.23
CiitaP79621 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CiitaP79621 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CiitaP79621 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CiitaP79621 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.46■□□□□ 0.23
CiitaP79621 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CiitaP79621 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CiitaP79621 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.46■□□□□ 0.23
CiitaP79621 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.46■□□□□ 0.23
CiitaP79621 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CiitaP79621 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CiitaP79621 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CiitaP79621 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CiitaP79621 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.46■□□□□ 0.22
CiitaP79621 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CiitaP79621 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.46■□□□□ 0.22
CiitaP79621 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CiitaP79621 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CiitaP79621 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CiitaP79621 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.45■□□□□ 0.22
CiitaP79621 Gm26308-201ENSMUST00000157768 69 ntBASIC16.45■□□□□ 0.22
CiitaP79621 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.45■□□□□ 0.22
CiitaP79621 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.45■□□□□ 0.22
CiitaP79621 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.45■□□□□ 0.22
CiitaP79621 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.45■□□□□ 0.22
CiitaP79621 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CiitaP79621 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.45■□□□□ 0.22
CiitaP79621 Celf4-206ENSMUST00000224553 1729 ntBASIC16.45■□□□□ 0.22
CiitaP79621 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CiitaP79621 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CiitaP79621 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CiitaP79621 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CiitaP79621 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CiitaP79621 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.44■□□□□ 0.22
CiitaP79621 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CiitaP79621 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.44■□□□□ 0.22
CiitaP79621 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms