Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tm6sf1P58749 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.66■□□□□ 0.58
Tm6sf1P58749 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Gm5364-201ENSMUST00000216789 889 ntBASIC18.66■□□□□ 0.58
Tm6sf1P58749 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.66■□□□□ 0.58
Tm6sf1P58749 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tm6sf1P58749 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tm6sf1P58749 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tm6sf1P58749 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tm6sf1P58749 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Tm6sf1P58749 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Gm44771-201ENSMUST00000206975 626 ntBASIC18.64■□□□□ 0.57
Tm6sf1P58749 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.64■□□□□ 0.57
Tm6sf1P58749 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC18.64■□□□□ 0.57
Tm6sf1P58749 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.64■□□□□ 0.57
Tm6sf1P58749 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Efs-202ENSMUST00000227037 2540 ntBASIC18.64■□□□□ 0.57
Tm6sf1P58749 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tm6sf1P58749 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Gm9727-201ENSMUST00000161387 555 ntBASIC18.63■□□□□ 0.57
Tm6sf1P58749 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.63■□□□□ 0.57
Tm6sf1P58749 AW822252-206ENSMUST00000208904 237 ntBASIC18.63■□□□□ 0.57
Tm6sf1P58749 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.63■□□□□ 0.57
Tm6sf1P58749 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.63■□□□□ 0.57
Tm6sf1P58749 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf1P58749 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.63■□□□□ 0.57
Tm6sf1P58749 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms