Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Gm13036-201ENSMUST00000117799 748 ntBASIC16.4■□□□□ 0.22
Nub1P54729 Gm11764-201ENSMUST00000120221 623 ntBASIC16.4■□□□□ 0.22
Nub1P54729 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.4■□□□□ 0.22
Nub1P54729 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nub1P54729 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.4■□□□□ 0.22
Nub1P54729 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.4■□□□□ 0.22
Nub1P54729 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nub1P54729 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nub1P54729 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.39■□□□□ 0.22
Nub1P54729 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.39■□□□□ 0.21
Nub1P54729 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.39■□□□□ 0.21
Nub1P54729 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Nub1P54729 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Nub1P54729 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.39■□□□□ 0.21
Nub1P54729 Gm18489-201ENSMUST00000172565 551 ntBASIC16.39■□□□□ 0.21
Nub1P54729 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.39■□□□□ 0.21
Nub1P54729 Gm9682-201ENSMUST00000197505 556 ntBASIC16.39■□□□□ 0.21
Nub1P54729 Gm45167-201ENSMUST00000208007 322 ntBASIC16.39■□□□□ 0.21
Nub1P54729 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.39■□□□□ 0.21
Nub1P54729 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nub1P54729 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Nub1P54729 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nub1P54729 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Nub1P54729 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.38■□□□□ 0.21
Nub1P54729 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.38■□□□□ 0.21
Nub1P54729 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Asic1-205ENSMUST00000228185 1818 ntBASIC16.38■□□□□ 0.21
Nub1P54729 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.38■□□□□ 0.21
Nub1P54729 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nub1P54729 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.38■□□□□ 0.21
Nub1P54729 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nub1P54729 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nub1P54729 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nub1P54729 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Nub1P54729 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nub1P54729 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nub1P54729 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nub1P54729 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.37■□□□□ 0.21
Nub1P54729 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Nub1P54729 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nub1P54729 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Nub1P54729 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nub1P54729 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.37■□□□□ 0.21
Nub1P54729 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.37■□□□□ 0.21
Nub1P54729 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms