Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.91■□□□□ 0.3
Brca1P48754 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Gm15823-201ENSMUST00000064305 670 ntBASIC16.91■□□□□ 0.3
Brca1P48754 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Brca1P48754 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.91■□□□□ 0.3
Brca1P48754 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Brca1P48754 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Brca1P48754 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Brca1P48754 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.91■□□□□ 0.3
Brca1P48754 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Brca1P48754 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Brca1P48754 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Brca1P48754 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Brca1P48754 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Brca1P48754 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.9■□□□□ 0.3
Brca1P48754 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.9■□□□□ 0.3
Brca1P48754 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Brca1P48754 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brca1P48754 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Brca1P48754 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Brca1P48754 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Gm17150-201ENSMUST00000165577 381 ntBASIC16.89■□□□□ 0.29
Brca1P48754 Gm21854-201ENSMUST00000179901 471 ntBASIC16.89■□□□□ 0.29
Brca1P48754 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.89■□□□□ 0.29
Brca1P48754 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.89■□□□□ 0.29
Brca1P48754 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.89■□□□□ 0.29
Brca1P48754 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Brca1P48754 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.89■□□□□ 0.29
Brca1P48754 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.89■□□□□ 0.29
Brca1P48754 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brca1P48754 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Brca1P48754 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Gm6222-201ENSMUST00000120787 396 ntBASIC16.88■□□□□ 0.29
Brca1P48754 Gm11918-201ENSMUST00000121660 179 ntBASIC16.88■□□□□ 0.29
Brca1P48754 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Brca1P48754 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Gm45098-201ENSMUST00000207179 657 ntBASIC16.88■□□□□ 0.29
Brca1P48754 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.88■□□□□ 0.29
Brca1P48754 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Brca1P48754 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.88■□□□□ 0.29
Brca1P48754 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brca1P48754 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms