Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nkx2-2P42586 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.96□□□□□ -0.17
Nkx2-2P42586 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Gm27628-201ENSMUST00000184911 107 ntBASIC13.96□□□□□ -0.17
Nkx2-2P42586 Gm2651-201ENSMUST00000203560 838 ntBASIC13.96□□□□□ -0.17
Nkx2-2P42586 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.96□□□□□ -0.17
Nkx2-2P42586 Mzt1-203ENSMUST00000227948 952 ntBASIC13.96□□□□□ -0.17
Nkx2-2P42586 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nkx2-2P42586 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-2P42586 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.96□□□□□ -0.18
Nkx2-2P42586 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-2P42586 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nkx2-2P42586 Sybu-209ENSMUST00000228639 4113 ntBASIC13.96□□□□□ -0.18
Nkx2-2P42586 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.95□□□□□ -0.18
Nkx2-2P42586 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.95□□□□□ -0.18
Nkx2-2P42586 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nkx2-2P42586 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.95□□□□□ -0.18
Nkx2-2P42586 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.94□□□□□ -0.18
Nkx2-2P42586 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.94□□□□□ -0.18
Nkx2-2P42586 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nkx2-2P42586 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms