Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sox6P40645 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.35□□□□□ -0.11
Sox6P40645 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.35□□□□□ -0.11
Sox6P40645 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sox6P40645 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sox6P40645 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sox6P40645 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Sox6P40645 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox6P40645 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sox6P40645 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.34□□□□□ -0.11
Sox6P40645 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.34□□□□□ -0.11
Sox6P40645 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Sox6P40645 Gm44454-201ENSMUST00000198541 138 ntBASIC14.34□□□□□ -0.11
Sox6P40645 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.34□□□□□ -0.11
Sox6P40645 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.34□□□□□ -0.11
Sox6P40645 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox6P40645 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Sox6P40645 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sox6P40645 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sox6P40645 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox6P40645 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox6P40645 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox6P40645 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sox6P40645 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox6P40645 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Sox6P40645 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.33□□□□□ -0.12
Sox6P40645 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Gm9103-201ENSMUST00000119371 405 ntBASIC14.33□□□□□ -0.12
Sox6P40645 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.33□□□□□ -0.12
Sox6P40645 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox6P40645 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.33□□□□□ -0.12
Sox6P40645 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sox6P40645 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Sox6P40645 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox6P40645 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox6P40645 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sox6P40645 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Sox6P40645 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.33□□□□□ -0.12
Sox6P40645 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox6P40645 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.32□□□□□ -0.12
Sox6P40645 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.32□□□□□ -0.12
Sox6P40645 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Sox6P40645 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sox6P40645 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.32□□□□□ -0.12
Sox6P40645 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.32□□□□□ -0.12
Sox6P40645 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sox6P40645 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.32□□□□□ -0.12
Sox6P40645 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.32□□□□□ -0.12
Sox6P40645 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sox6P40645 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms