Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.8□□□□□ -0.04
TfamP40630 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.8□□□□□ -0.04
TfamP40630 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.8□□□□□ -0.04
TfamP40630 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.8□□□□□ -0.04
TfamP40630 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TfamP40630 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TfamP40630 Gm14859-201ENSMUST00000117752 357 ntBASIC14.79□□□□□ -0.04
TfamP40630 Gm8344-201ENSMUST00000119813 856 ntBASIC14.79□□□□□ -0.04
TfamP40630 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.79□□□□□ -0.04
TfamP40630 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.79□□□□□ -0.04
TfamP40630 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.79□□□□□ -0.04
TfamP40630 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
TfamP40630 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TfamP40630 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TfamP40630 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TfamP40630 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TfamP40630 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TfamP40630 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.79□□□□□ -0.04
TfamP40630 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TfamP40630 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.78□□□□□ -0.04
TfamP40630 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TfamP40630 Gm12895-201ENSMUST00000122214 226 ntBASIC14.78□□□□□ -0.04
TfamP40630 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.78□□□□□ -0.04
TfamP40630 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.78□□□□□ -0.04
TfamP40630 Gm8655-201ENSMUST00000221159 852 ntBASIC14.78□□□□□ -0.04
TfamP40630 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.78□□□□□ -0.04
TfamP40630 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.78□□□□□ -0.04
TfamP40630 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TfamP40630 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.78□□□□□ -0.04
TfamP40630 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TfamP40630 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TfamP40630 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TfamP40630 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TfamP40630 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TfamP40630 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TfamP40630 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.77□□□□□ -0.04
TfamP40630 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TfamP40630 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TfamP40630 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
TfamP40630 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
TfamP40630 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TfamP40630 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.77□□□□□ -0.05
TfamP40630 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.77□□□□□ -0.05
TfamP40630 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TfamP40630 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.77□□□□□ -0.05
TfamP40630 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.77□□□□□ -0.05
TfamP40630 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TfamP40630 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TfamP40630 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TfamP40630 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TfamP40630 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TfamP40630 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TfamP40630 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.77□□□□□ -0.05
TfamP40630 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
TfamP40630 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TfamP40630 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TfamP40630 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TfamP40630 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TfamP40630 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms