Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pde6bP23440 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pde6bP23440 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.63■□□□□ 0.25
Pde6bP23440 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.63■□□□□ 0.25
Pde6bP23440 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Pde6bP23440 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.63■□□□□ 0.25
Pde6bP23440 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.63■□□□□ 0.25
Pde6bP23440 Gm5177-201ENSMUST00000183092 997 ntBASIC16.63■□□□□ 0.25
Pde6bP23440 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.63■□□□□ 0.25
Pde6bP23440 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.63■□□□□ 0.25
Pde6bP23440 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.63■□□□□ 0.25
Pde6bP23440 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pde6bP23440 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.63■□□□□ 0.25
Pde6bP23440 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pde6bP23440 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pde6bP23440 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.62■□□□□ 0.25
Pde6bP23440 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pde6bP23440 Gm15427-201ENSMUST00000117288 531 ntBASIC16.62■□□□□ 0.25
Pde6bP23440 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.62■□□□□ 0.25
Pde6bP23440 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Gm45747-201ENSMUST00000212203 999 ntBASIC16.62■□□□□ 0.25
Pde6bP23440 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pde6bP23440 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Pde6bP23440 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.61■□□□□ 0.25
Pde6bP23440 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.61■□□□□ 0.25
Pde6bP23440 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pde6bP23440 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.61■□□□□ 0.25
Pde6bP23440 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.61■□□□□ 0.25
Pde6bP23440 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.61■□□□□ 0.25
Pde6bP23440 Gm44872-201ENSMUST00000207864 420 ntBASIC16.61■□□□□ 0.25
Pde6bP23440 Gm18246-201ENSMUST00000221023 728 ntBASIC16.61■□□□□ 0.25
Pde6bP23440 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.61■□□□□ 0.25
Pde6bP23440 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Pde6bP23440 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.61■□□□□ 0.25
Pde6bP23440 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.61■□□□□ 0.25
Pde6bP23440 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pde6bP23440 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pde6bP23440 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pde6bP23440 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms