Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smim1P0C8K7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smim1P0C8K7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smim1P0C8K7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smim1P0C8K7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Gm7638-201ENSMUST00000121348 967 ntBASIC10.52□□□□□ -0.73
Smim1P0C8K7 Appbp2os-202ENSMUST00000206972 447 ntBASIC10.52□□□□□ -0.73
Smim1P0C8K7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.52□□□□□ -0.73
Smim1P0C8K7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smim1P0C8K7 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Gm21168-201ENSMUST00000199646 1096 ntBASIC10.51□□□□□ -0.73
Smim1P0C8K7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.51□□□□□ -0.73
Smim1P0C8K7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Smim1P0C8K7 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.51□□□□□ -0.73
Smim1P0C8K7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smim1P0C8K7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Smim1P0C8K7 Gm6257-201ENSMUST00000163864 910 ntBASIC10.5□□□□□ -0.73
Smim1P0C8K7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms