Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
ApoeP08226 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.44□□□□□ -0.1
ApoeP08226 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
ApoeP08226 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
ApoeP08226 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
ApoeP08226 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ApoeP08226 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
ApoeP08226 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ApoeP08226 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.43□□□□□ -0.1
ApoeP08226 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.43□□□□□ -0.1
ApoeP08226 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.43□□□□□ -0.1
ApoeP08226 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ApoeP08226 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ApoeP08226 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ApoeP08226 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ApoeP08226 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
ApoeP08226 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.42□□□□□ -0.1
ApoeP08226 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm8825-201ENSMUST00000182565 998 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm4518-201ENSMUST00000182638 718 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm29257-201ENSMUST00000186115 639 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.42□□□□□ -0.1
ApoeP08226 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ApoeP08226 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.42□□□□□ -0.1
ApoeP08226 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.42□□□□□ -0.1
ApoeP08226 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
ApoeP08226 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ApoeP08226 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ApoeP08226 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.41□□□□□ -0.1
ApoeP08226 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ApoeP08226 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.41□□□□□ -0.1
ApoeP08226 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.41□□□□□ -0.1
ApoeP08226 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ApoeP08226 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ApoeP08226 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms