Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a2P08122 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.01□□□□□ -0.17
Col4a2P08122 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a2P08122 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a2P08122 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Col4a2P08122 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col4a2P08122 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col4a2P08122 Gm12490-201ENSMUST00000120255 560 ntBASIC14.01□□□□□ -0.17
Col4a2P08122 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.01□□□□□ -0.17
Col4a2P08122 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.01□□□□□ -0.17
Col4a2P08122 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.01□□□□□ -0.17
Col4a2P08122 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Col4a2P08122 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col4a2P08122 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col4a2P08122 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Gm22189-201ENSMUST00000103822 86 ntBASIC14□□□□□ -0.17
Col4a2P08122 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Gm6539-201ENSMUST00000119157 1064 ntBASIC14□□□□□ -0.17
Col4a2P08122 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Col4a2P08122 Gm9719-201ENSMUST00000162765 543 ntBASIC14□□□□□ -0.17
Col4a2P08122 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14□□□□□ -0.17
Col4a2P08122 Gm6473-201ENSMUST00000188572 1210 ntBASIC14□□□□□ -0.17
Col4a2P08122 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14□□□□□ -0.17
Col4a2P08122 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col4a2P08122 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Col4a2P08122 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col4a2P08122 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14□□□□□ -0.17
Col4a2P08122 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Col4a2P08122 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col4a2P08122 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.99□□□□□ -0.17
Col4a2P08122 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col4a2P08122 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col4a2P08122 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.99□□□□□ -0.17
Col4a2P08122 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col4a2P08122 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Col4a2P08122 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col4a2P08122 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.98□□□□□ -0.17
Col4a2P08122 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col4a2P08122 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col4a2P08122 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Col4a2P08122 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col4a2P08122 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
Col4a2P08122 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Col4a2P08122 Celf4-206ENSMUST00000224553 1729 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms