Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.57■□□□□ 0.56
Setdb1O88974 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Setdb1O88974 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Setdb1O88974 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Setdb1O88974 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Setdb1O88974 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Setdb1O88974 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Setdb1O88974 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Setdb1O88974 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Gm16198-201ENSMUST00000118766 670 ntBASIC18.56■□□□□ 0.56
Setdb1O88974 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.56■□□□□ 0.56
Setdb1O88974 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Gm18246-201ENSMUST00000221023 728 ntBASIC18.56■□□□□ 0.56
Setdb1O88974 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Setdb1O88974 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.56■□□□□ 0.56
Setdb1O88974 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Setdb1O88974 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Setdb1O88974 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Setdb1O88974 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.55■□□□□ 0.56
Setdb1O88974 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.55■□□□□ 0.56
Setdb1O88974 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Setdb1O88974 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Setdb1O88974 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.55■□□□□ 0.56
Setdb1O88974 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.55■□□□□ 0.56
Setdb1O88974 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Setdb1O88974 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Setdb1O88974 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Mir8102-201ENSMUST00000184148 139 ntBASIC18.54■□□□□ 0.56
Setdb1O88974 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.54■□□□□ 0.56
Setdb1O88974 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Setdb1O88974 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.54■□□□□ 0.56
Setdb1O88974 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.54■□□□□ 0.56
Setdb1O88974 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Setdb1O88974 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.54■□□□□ 0.56
Setdb1O88974 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.54■□□□□ 0.56
Setdb1O88974 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Setdb1O88974 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Setdb1O88974 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Setdb1O88974 Gm10499-201ENSMUST00000174094 934 ntBASIC18.53■□□□□ 0.56
Setdb1O88974 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.53■□□□□ 0.56
Setdb1O88974 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Setdb1O88974 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Mir7684-201ENSMUST00000183858 60 ntBASIC18.52■□□□□ 0.56
Setdb1O88974 Gm27989-201ENSMUST00000184721 107 ntBASIC18.52■□□□□ 0.56
Setdb1O88974 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.52■□□□□ 0.56
Setdb1O88974 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.52■□□□□ 0.56
Setdb1O88974 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Setdb1O88974 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Setdb1O88974 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Setdb1O88974 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Setdb1O88974 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Setdb1O88974 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms