Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.61□□□□□ -0.07
Best1O88870 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.61□□□□□ -0.07
Best1O88870 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Best1O88870 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Best1O88870 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.6□□□□□ -0.07
Best1O88870 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Best1O88870 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Best1O88870 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Best1O88870 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.59□□□□□ -0.07
Best1O88870 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.59□□□□□ -0.07
Best1O88870 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.59□□□□□ -0.07
Best1O88870 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.59□□□□□ -0.07
Best1O88870 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Best1O88870 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.59□□□□□ -0.07
Best1O88870 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.59□□□□□ -0.07
Best1O88870 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Best1O88870 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Best1O88870 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.59□□□□□ -0.07
Best1O88870 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.59□□□□□ -0.07
Best1O88870 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Best1O88870 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Best1O88870 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Best1O88870 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Best1O88870 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Best1O88870 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Best1O88870 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Best1O88870 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Best1O88870 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Best1O88870 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.58□□□□□ -0.08
Best1O88870 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Best1O88870 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Gm18737-201ENSMUST00000173594 937 ntBASIC14.58□□□□□ -0.08
Best1O88870 Gm18889-201ENSMUST00000174284 929 ntBASIC14.58□□□□□ -0.08
Best1O88870 Mir6990-201ENSMUST00000183724 91 ntBASIC14.58□□□□□ -0.08
Best1O88870 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.58□□□□□ -0.08
Best1O88870 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.58□□□□□ -0.08
Best1O88870 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Best1O88870 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Best1O88870 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.58□□□□□ -0.08
Best1O88870 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Best1O88870 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Best1O88870 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.58□□□□□ -0.08
Best1O88870 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Best1O88870 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.58□□□□□ -0.08
Best1O88870 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms