Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Gm11594-201ENSMUST00000122313 162 ntBASIC14.89□□□□□ -0.03
ClppO88696 Mir8117-201ENSMUST00000184773 107 ntBASIC14.89□□□□□ -0.03
ClppO88696 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.89□□□□□ -0.03
ClppO88696 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ClppO88696 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
ClppO88696 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.89□□□□□ -0.03
ClppO88696 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.89□□□□□ -0.03
ClppO88696 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
ClppO88696 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
ClppO88696 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.89□□□□□ -0.03
ClppO88696 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
ClppO88696 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
ClppO88696 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ClppO88696 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ClppO88696 Gm14494-201ENSMUST00000118786 435 ntBASIC14.88□□□□□ -0.03
ClppO88696 Gm15358-201ENSMUST00000119249 520 ntBASIC14.88□□□□□ -0.03
ClppO88696 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.88□□□□□ -0.03
ClppO88696 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.88□□□□□ -0.03
ClppO88696 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.88□□□□□ -0.03
ClppO88696 Gm6257-201ENSMUST00000163864 910 ntBASIC14.88□□□□□ -0.03
ClppO88696 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.88□□□□□ -0.03
ClppO88696 Gm37153-201ENSMUST00000193637 231 ntBASIC14.88□□□□□ -0.03
ClppO88696 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.88□□□□□ -0.03
ClppO88696 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
ClppO88696 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.88□□□□□ -0.03
ClppO88696 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
ClppO88696 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
ClppO88696 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.88□□□□□ -0.03
ClppO88696 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
ClppO88696 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ClppO88696 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.87□□□□□ -0.03
ClppO88696 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.87□□□□□ -0.03
ClppO88696 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.87□□□□□ -0.03
ClppO88696 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ClppO88696 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.87□□□□□ -0.03
ClppO88696 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.87□□□□□ -0.03
ClppO88696 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.87□□□□□ -0.03
ClppO88696 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ClppO88696 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ClppO88696 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.87□□□□□ -0.03
ClppO88696 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
ClppO88696 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ClppO88696 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ClppO88696 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ClppO88696 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.86□□□□□ -0.03
ClppO88696 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.86□□□□□ -0.03
ClppO88696 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ClppO88696 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms