Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Slc28a2O88627 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Slc28a2O88627 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.59□□□□□ -0.23
Slc28a2O88627 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Slc28a2O88627 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.59□□□□□ -0.23
Slc28a2O88627 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Slc28a2O88627 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.59□□□□□ -0.23
Slc28a2O88627 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.59□□□□□ -0.23
Slc28a2O88627 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Slc28a2O88627 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Slc28a2O88627 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Slc28a2O88627 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Slc28a2O88627 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Slc28a2O88627 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 BC037039-201ENSMUST00000192003 2205 ntBASIC13.58□□□□□ -0.24
Slc28a2O88627 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Gm6257-201ENSMUST00000163864 910 ntBASIC13.58□□□□□ -0.24
Slc28a2O88627 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.58□□□□□ -0.24
Slc28a2O88627 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.58□□□□□ -0.24
Slc28a2O88627 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.58□□□□□ -0.24
Slc28a2O88627 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.58□□□□□ -0.24
Slc28a2O88627 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.58□□□□□ -0.24
Slc28a2O88627 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Slc28a2O88627 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Slc28a2O88627 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Slc28a2O88627 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.57□□□□□ -0.24
Slc28a2O88627 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Slc28a2O88627 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.57□□□□□ -0.24
Slc28a2O88627 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.57□□□□□ -0.24
Slc28a2O88627 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.57□□□□□ -0.24
Slc28a2O88627 Gm44454-201ENSMUST00000198541 138 ntBASIC13.57□□□□□ -0.24
Slc28a2O88627 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.57□□□□□ -0.24
Slc28a2O88627 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Slc28a2O88627 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Slc28a2O88627 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Slc28a2O88627 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.56□□□□□ -0.24
Slc28a2O88627 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Slc28a2O88627 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.56□□□□□ -0.24
Slc28a2O88627 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Slc28a2O88627 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.56□□□□□ -0.24
Slc28a2O88627 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Slc28a2O88627 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms