Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.69□□□□□ -0.22
Cops3O88543 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.69□□□□□ -0.22
Cops3O88543 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm8825-201ENSMUST00000182565 998 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm4518-201ENSMUST00000182638 718 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cops3O88543 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cops3O88543 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cops3O88543 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cops3O88543 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cops3O88543 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.69□□□□□ -0.22
Cops3O88543 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.69□□□□□ -0.22
Cops3O88543 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.69□□□□□ -0.22
Cops3O88543 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cops3O88543 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Cops3O88543 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.68□□□□□ -0.22
Cops3O88543 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cops3O88543 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.68□□□□□ -0.22
Cops3O88543 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.68□□□□□ -0.22
Cops3O88543 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.68□□□□□ -0.22
Cops3O88543 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.68□□□□□ -0.22
Cops3O88543 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cops3O88543 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.67□□□□□ -0.22
Cops3O88543 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cops3O88543 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cops3O88543 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Cops3O88543 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Cops3O88543 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.67□□□□□ -0.22
Cops3O88543 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.67□□□□□ -0.22
Cops3O88543 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Cops3O88543 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.67□□□□□ -0.22
Cops3O88543 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cops3O88543 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cops3O88543 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms