Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Gm5364-201ENSMUST00000216789 889 ntBASIC14.16□□□□□ -0.14
BckdkO55028 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
BckdkO55028 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.15□□□□□ -0.14
BckdkO55028 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
BckdkO55028 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
BckdkO55028 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
BckdkO55028 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.15□□□□□ -0.14
BckdkO55028 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
BckdkO55028 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.15□□□□□ -0.14
BckdkO55028 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
BckdkO55028 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.15□□□□□ -0.14
BckdkO55028 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.15□□□□□ -0.14
BckdkO55028 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.15□□□□□ -0.14
BckdkO55028 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.15□□□□□ -0.14
BckdkO55028 Gm5867-201ENSMUST00000063197 592 ntBASIC14.15□□□□□ -0.14
BckdkO55028 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
BckdkO55028 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
BckdkO55028 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
BckdkO55028 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
BckdkO55028 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.14□□□□□ -0.15
BckdkO55028 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
BckdkO55028 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.14□□□□□ -0.15
BckdkO55028 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.14□□□□□ -0.15
BckdkO55028 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.14□□□□□ -0.15
BckdkO55028 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Gm37935-201ENSMUST00000192012 982 ntBASIC14.14□□□□□ -0.15
BckdkO55028 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.14□□□□□ -0.15
BckdkO55028 Psmb5-202ENSMUST00000227257 622 ntBASIC14.14□□□□□ -0.15
BckdkO55028 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
BckdkO55028 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
BckdkO55028 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
BckdkO55028 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
BckdkO55028 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
BckdkO55028 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.13□□□□□ -0.15
BckdkO55028 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
BckdkO55028 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
BckdkO55028 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
BckdkO55028 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.13□□□□□ -0.15
BckdkO55028 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.13□□□□□ -0.15
BckdkO55028 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.13□□□□□ -0.15
BckdkO55028 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.13□□□□□ -0.15
BckdkO55028 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.13□□□□□ -0.15
BckdkO55028 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
BckdkO55028 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms