Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rnf13O54965 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Rnf13O54965 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rnf13O54965 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rnf13O54965 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Rnf13O54965 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Rnf13O54965 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rnf13O54965 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Rnf13O54965 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.83□□□□□ -0.2
Rnf13O54965 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.83□□□□□ -0.2
Rnf13O54965 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rnf13O54965 Gm45328-201ENSMUST00000210942 917 ntBASIC13.83□□□□□ -0.2
Rnf13O54965 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.83□□□□□ -0.2
Rnf13O54965 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rnf13O54965 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rnf13O54965 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rnf13O54965 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf13O54965 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rnf13O54965 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf13O54965 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf13O54965 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rnf13O54965 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm10231-201ENSMUST00000181584 441 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm8825-201ENSMUST00000182565 998 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm4518-201ENSMUST00000182638 718 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.82□□□□□ -0.2
Rnf13O54965 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm10175-202ENSMUST00000208752 441 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Rnf13O54965 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Rnf13O54965 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.82□□□□□ -0.2
Rnf13O54965 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Rnf13O54965 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Rnf13O54965 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rnf13O54965 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms